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AKTU Bioinformatics-I (Virtual Lab) (BBT553) Syllabus PDF – B.Tech 3rd Year
Bioinformatics-I (Virtual Lab) BBT553
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Official AKTU syllabus of Bioinformatics-I (Virtual Lab) (BBT553) for B.Tech 3rd Year – 2 credits, L-T-P 0-0-2. Read the unit-wise course content, course outcomes, evaluation pattern and recommended books online, or download the PDF.
Syllabus — Bioinformatics-I (Virtual Lab)
Download PDFBBT553 · 2 credits · L-T-P 0-0-2
Course Objectives
To retrieval of the sequence data Demonstration of locating the chromosome and retrieval of gene expression data To provide practical knowledge for retrieval of PubMed data Practical knowledge of ORF finding, motif information and retrieval of Gene information COURSE OUTCOMES (SIX): Upon completion of this course, the students will be able to:
| CO1 | Demonstrate the retrieval of sequence data |
| CO2 | Perform experiments related to locating chromosome and gene expression data |
| CO3 | Demonstrate the data retrieval system of PubMed. |
| CO4 | Perform the ORF finding and retrieval of gene information |
| CO5 | Utilize the Protein Data Bank (PDB) database to retrieve and interpret structural data of proteins. |
| CO6 | Use the Prosite database to identify and retrieve motif information associated with protein sequences. |
CO-PO MAPPING (1 TO 3 SCALE)
| CO/PO | PO-1 | PO-2 | PO-3 | PO-4 | PO-5 PO-6 PO-7 PO-8 PO-9 PO- 10 PO- 11 PO- 12 |
| CO-1 | 3 | 1 | 2 | 1 | 2 1 |
| CO-2 | 3 | 2 | 1 | 2 | 1 |
| CO-3 | 1 | 2 | 1 | 2 | 1 |
| CO-4 | 1 | 2 | 1 | 2 | 1 |
| CO-5 | 3 | 1 | 2 | 1 | |
| CO-6 | 3 | 1 | 2 | 1 |
Reference Books
- Alphey L. DNA sequencing: from experimental methods to bioinformatics. BIOS scientific publishers Ltd; 1997
- Iftekhar M, Ghalib MR. Bioinformatics Practical Manual
- Karthikeyan M, Vyas R. Practical chemoinformatics. Springer; 2014 May 6
| COURSE DETAILS: BIOINFORMATICS I (VIRTUAL LAB) | ||
| Unit | Content | Contact Hours |
| I | Retrieving sequence data from Entrez: Learn how to access and retrieve nucleotide and protein sequences from the Entrez system, a key resource for bioinformatics research. | 1 |
| II | Retrieving structural data of a protein using PDB database: Acquire the skills to retrieve and interpret 3D protein structures from the Protein Data Bank (PDB) to understand protein function and interactions. | 1 |
| III | Retrieving Motif Information of a Protein Using Prosite: Explore how to identify and analyze protein motifs using the Prosite database, enhancing your understanding of protein function and classification. | 1 |
| IV | Locating the chromosome of a Gene : Develop the ability to accurately locate and interpret the chromosomal position of genes, which is crucial for studying genomic organization and gene function. | 2 |
| V | Finding ORF of a Given Sequence: Gain expertise in identifying open reading frames (ORFs) within nucleotide sequences, a fundamental step in gene prediction and analysis. | 1 |
| VI | Locating the chromosome of a Gene: Learn to identify the chromosomal location of specific genes, which is essential for understanding their role in genetics and genomic organization. | 2 |
B.Tech. (Biotechnology) 3 rd Year 6 th Sem
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